PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC009915.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family GeBP
Protein Properties Length: 428aa    MW: 47696.4 Da    PI: 4.7274
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC009915.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57329.62e-097098229
        DUF573  2 lfqrlwseeDeivlLqGlidfkaktgk.s 29
                  lfq lw++eDei lL+G++d+++++g  s
  EcC009915.10 70 LFQCLWTDEDEIELLRGFLDYTTQRGRaS 98
                  69************************853 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF747881.67E-6225258IPR016159Cullin repeat-like-containing domain
SuperFamilySSF747881.67E-6291376IPR016159Cullin repeat-like-containing domain
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    Send to blast
MARRGRASPD LAMATLPATG EGEGRPRPVA GKAAIAIATS AASPVPPIVG TISPSELKRP  60
SQAVTVTKTL FQCLWTDEDE IELLRGFLDY TTQRGRASPS PVADEGRARW IMASQEDEAA  120
IAKLDSACKD LKALLQRSAD LDRNMEKMDR RFDLIDQSLS LASRRVAPLQ SMAMANKALD  180
TRINRAVTPA LSLLHSFRLF ESLQADIFDL SARLSGEVGP SPNRLRRLLE YVDCVDRLKA  240
AVSSISEEGE PAIQKLQEVV EFLSRTKATD NFRTHRLRET LVTLKALYET EVDAMRFEGL  300
LDEALLQLQD EYEGLLQQLK HENVGEAQEG GDGEFAVSEL GSEQEVEVLR RISETLAAND  360
CLDICIDIFV KVRSDTRIPS EFFANFVYDE AMSCIDIFSD SSRFRFLLVL ILHFMLIPHL  420
FDDTKRIT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010064158.11e-178PREDICTED: exocyst complex component EXO70A1-like
TrEMBLA0A059BK381e-178A0A059BK38_EUCGR; Uncharacterized protein
STRINGVIT_18s0001g09020.t011e-113(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.16e-09DNA-binding storekeeper protein-related transcriptional regulator